Signature	SharedGeneNum	SharedGenes	AvgPval	BreastC_M14 Basal_UniqueNum	BreastC_M14 Basal_pVal	BreastC_M14 Basal_Unique	ColonC_M34 HOXA_UniqueNum	ColonC_M34 HOXA_pVal	ColonC_M34 HOXA_Unique
BENPORATH_EED_TARGETS	6	HOXA1|HOXA2|HOXA3|HOXA4|HOXA7|HOXA10	1.45964948487e-07	97	2.6666954863e-07	ADGRG6|ADM|AMOT|BARX1|BATF3|BRINP3|BVES|C2CD4A|CA3|CDKN2C|CHODL|CHRDL2|CLIP4|COL27A1|COLGALT2|CRLF1|CXCL16|CYP24A1|CYP26B1|DKK1|DLX5|DSC3|DUOX1|DUOX2|DUOXA1|EGFR|EN1|EPHB1|EPHB3|EPHX3|ERICH5|ESYT3|EVA1C|EYA2|FAM84A|FAM89A|FGF9|FOXC1|FOXL1|FRMD3|FUT4|FZD8|GALNT18|GATA6|GLIPR2|GPM6B|HLF|HOXA6|IRX4|KCNC4|KCNJ2|KCNK17|KCNQ5|KIRREL3|LONRF3|LYPD1|MAP3K5|MAPK4|MID1|MPHOSPH6|NAV2|NFIX|NRG2|NTN1|NXPH4|OCA2|OGFRL1|OLIG1|OSR1|PCDH8|PKP1|POU3F2|POU4F1|PPP1R14C|PRDM13|PROK2|RGS20|RYR3|SFRP1|SHC4|SIM1|SIX3|SLC9A2|SLC35F3|ST8SIA1|TGFA|TGFB2|TLX1|TNFRSF11A|TSLP|TSPAN6|TTYH1|TUBA4A|ULBP2|ZIC1|ZMYND15|ZNF711	3	2.52603483442e-08	FOXG1|HOXA9|HOXA13
CDPCR3_01	1	HOXA4	0.000465530068437	13	4.46865186387e-06	ADGRL2|DLX5|HDAC4|KBTBD12|MARK1|NTN1|PAK3|RIPK4|SIX3|SLAIN1|SP6|TSPAN6|ZIC1	1	0.00092659148501	FOXG1
CEBP_Q2_01	4	HOXA1|HOXA2|HOXA5|HOXA10	3.12143686077e-05	41	1.52774866347e-09	ANGPT1|ARRDC3|ATP13A4|C2CD2|CALML4|CITED4|CLDN8|DLG2|DMD|DOCK3|EGFR|EPHB6|ETV5|ETV6|FIGN|FMO2|HDAC4|IL1R2|KLF5|KRT23|LIPG|LMO4|LONRF3|LYPD1|MPP6|NDP|NFIL3|NFIX|PDE4D|PLA2G4A|PPL|RGR|S1PR5|SIRPA|SLC6A15|SLC12A1|STMN1|TCF7L1|TNNC2|TP63|UBE2E2	0	6.24272094668e-05	
CHARAFE_BREAST_CANCER_LUMINAL_VS_BASAL_DN	4	HOXA1|HOXA3|HOXA5|IGF2BP2	7.4880417874e-07	142	2.62507237077e-62	ADM|ADORA2B|AKR1B10|ALDH1A3|ANXA3|ARHGAP5|ARNTL2|B3GNT5|BICD2|BTG3|CARD6|CBR1|CCDC9B|CCDC82|CCNA1|CCNYL1|CD59|CDH3|CDK6|CHST3|CLIP4|CORO1C|CRYAB|CXCL1|CXCL2|CXCL3|DCBLD2|DEPP1|DMD|DSC3|DSG2|DSG3|DUOX1|EGFR|EPHA2|ETS2|EVA1C|FAM83A|FAM171A1|FERMT1|FGF2|FGFBP1|FMNL2|FNDC3B|FSCN1|GABRE|GFOD1|GJB3|GNA15|GNAI1|GPM6B|GSTP1|HIF1A|HRCT1|IFNGR1|IGF2BP3|IL1RAP|IRX1|ITGA6|ITGB8|ITM2C|KIF1B|KLF5|KLHL29|KLK5|KLK10|KRT5|KRT6A|KRT6B|KRT14|KRT15|KRT16|KRT17|LAMB3|LAMC2|LARP6|LINC01133|LIPG|LY6K|MAML2|MET|MFGE8|MSN|MTMR2|MYO1E|NAB1|NAMPT|NAV2|OGFRL1|OSBPL3|OSMR|PARP4|PDZK1IP1|PERP|PHLDA1|PI3|PLA2G4A|PM20D2|PNLIPRP3|PPP1R14C|PRKD3|PRNP|PRSS12|PSAT1|PTGS2|PTK7|PXDC1|RBMS1|RGL1|RGS2|RGS20|RIPK4|RND3|RNF145|RRAS2|S100A2|SCHIP1|SCPEP1|SERPINB5|SERPINE2|SFRP1|SIRPA|SLC6A15|SLC9A6|SLC16A1|SLPI|SVIL|TBC1D1|TGFA|TMEM154|TNFRSF10D|TP63|TRIM29|TUBA4A|TUBB6|UBASH3B|UBE2E3|UPP1|VSNL1|YBX1|YBX3|ZC3H12C	2	1.49760835748e-06	HMGA2|SKAP2
DAVICIONI_MOLECULAR_ARMS_VS_ERMS_DN	2	HOXA10|IGF2BP2	0.000471199456941	23	0.000445531250818	AMPD2|ARL4A|CSRNP3|CYP26B1|DENND2A|DUSP7|EGFR|EPHB3|FABP5|FNDC3B|FZD7|GAREM1|GAS2|ITM2C|OCA2|PRAME|RGL1|SCARA3|SLC43A3|SMCO4|SOSTDC1|TP63|ZIC1	1	0.000496867663063	HMGA2
Developmental protein	7	HOXA1|HOXA2|HOXA3|HOXA4|HOXA5|HOXA7|HOXA10	2.75909334988e-08	91	5.51711185902e-08	ADCYAP1R1|AGFG1|ANGPT1|ANGPTL4|ARHGAP22|ASB1|B3GNT5|BMP2|BVES|C1GALT1|CAVIN4|CHRDL2|COL13A1|COLEC11|CREB3L2|CREM|CSRP2|CXCL17|DAB2IP|DAZAP1|DBN1|DCX|DIAPH2|DKK1|DLX5|DLX6|DZIP1|EFNA5|EGFR|EN1|EPHA4|EPHB3|EYA2|FAM3C|FGF2|FGF9|FZD5|FZD7|FZD8|GPM6B|GPR157|GRHL1|HACD1|HECA|HEY2|HOXA6|INVS|JARID2|LEFTY2|MDFI|MGP|NDRG2|NES|NGEF|NGFR|NOTCH1|NPM2|NRARP|OLIG1|PAK3|PI15|PIWIL4|PKP1|POU4F1|PRKX|QKI|RYR1|RYR2|SERPINE2|SFRP1|SIK1|SIM1|SIX3|SLC2A14|SMO|SMOC1|SOX11|SRPK3|STMN1|TDRD6|TLX1|TNFSF11|TP63|TRNP1|TSHZ2|VANGL2|WIF1|WIPF3|ZFP57|ZIC1|ZNF521	4	1.07484074764e-11	FOXG1|HOXA9|HOXA11|HOXA13
GFI1_01	3	HOXA3|HOXA7|HOXA10	3.245104239e-05	36	5.42668185662e-07	AGPAT4|ANGPT1|BRINP3|C15ORF41|CCSER2|CHRM1|CREB5|CREM|DCX|DLG2|DSG3|EDN1|GABBR2|GAS2|HOXA6|MEX3B|MPZL2|MPZL3|NGEF|PCDH8|PDE4D|PI15|PPARGC1A|PPARGC1B|PRIMA1|RAB6B|SKIDA1|SLC25A18|SOSTDC1|SOX4|SOX9|STMN1|TMEM71|TMPRSS2|ZIC1|ZNF521	1	6.43594165943e-05	HOXA9
Human Breast_Charafe-Jauffret06_1233genes (16288205-GeneTable2)	4	HOXA1|HOXA3|HOXA5|IGF2BP2	2.30057018257e-05	143	2.60023243255e-29	ADM|ADORA2B|AKR1B10|ANXA3|ANXA8|ARHGAP5|ARNTL2|B3GNT5|BICD2|BTG3|CARD6|CBR1|CCDC82|CCNA1|CCNYL1|CD59|CDH3|CDK6|CHST3|CLIP4|CORO1C|CRYAB|CXCL1|CXCL2|CXCL3|DCBLD2|DEPP1|DMD|DSC3|DSG2|DSG3|DUOX1|EGFR|EPHA2|ETS2|EVA1C|FAM83A|FAM171A1|FERMT1|FGF2|FGFBP1|FMNL2|FNDC3B|FRMD4A|FSCN1|GABRE|GFOD1|GJB3|GNA15|GNAI1|GPM6B|GSTP1|HIF1A|HRCT1|IFNGR1|IGF2BP3|IL1RAP|IRX1|ITGA6|ITM2C|KDM7A|KIF1B|KLF5|KLHL29|KLK5|KLK10|KRT5|KRT6A|KRT6B|KRT14|KRT15|KRT16|LAMB3|LAMC2|LARP6|LIPG|LRRK1|LRRN1|LY6K|MAML2|MET|MFGE8|MSN|MTMR2|MYO1E|NAB1|NAV2|OGFRL1|OSBPL3|OSMR|OXR1|PDZK1IP1|PERP|PHLDA1|PI3|PLA2G4A|PM20D2|PNLIPRP3|PPP1R14C|PRKD3|PRNP|PRSS12|PSAT1|PTGS2|PTK7|PXDC1|RBMS1|RGL1|RGS2|RGS20|RIPK4|RND3|RNF145|RRAS2|S100A2|SBK1|SCHIP1|SCPEP1|SERPINB5|SERPINE2|SFRP1|SIRPA|SLC6A15|SLC9A6|SLC16A1|SLPI|ST3GAL6|SVIL|TBC1D1|TGFA|TMEM154|TNFRSF10D|TP63|TRIM29|TUBA4A|TUBB6|UBASH3B|UBE2E3|UPP1|VSNL1|YBX1|YBX3|ZC3H12C	2	4.60114036514e-05	HMGA2|SKAP2
Human Leukemia_Andreeff08_09genes (18668134-SuppTable6)	7	HOXA1|HOXA2|HOXA3|HOXA4|HOXA5|HOXA7|HOXA10	2.32682539994e-08	0	4.65365079988e-08		1	4.35197812131e-25	HOXA9
Human Leukemia_Andreeff08_12genes (18668134-SuppTable7)	6	HOXA2|HOXA3|HOXA4|HOXA5|HOXA7|HOXA10	1.58554583456e-05	0	3.17109166911e-05		1	7.61852664443e-20	HOXA9
Human Leukemia_Andreeff08_13genes (18668134-SuppTable8)	5	HOXA1|HOXA3|HOXA4|HOXA7|HOXA10	0.000364651470342	0	0.000729302940462		0	2.22536754972e-13	
Human Leukemia_Andreeff08_21genes (18668134-SuppTable4)	7	HOXA1|HOXA2|HOXA3|HOXA4|HOXA5|HOXA7|HOXA10	0.000109763404007	0	0.000219526808015		3	2.96072065315e-27	HOXA9|HOXA11|HOXA13
Human Leukemia_Chiaretti05_63genes (16243790-Table2)	2	HOXA5|HOXA10	8.24705087622e-05	11	0.000144654292785	CCNA1|DIAPH2|FAT1|FGF9|FUT4|ITGA6|KANK1|PROM1|PRSS12|TMSB15A|VLDLR	1	2.02867247395e-05	HOXA9
Human Leukemia_Dufour10_83genes (20038735-TableA2)	2	HOXA5|HOXA10	9.07871087059e-05	13	0.000140698543662	ARL4C|CEBPB|CSRP2|CSTB|DDIT4|ITM2C|KLF11|PELI1|POU4F1|S100A8|S100B|SCHIP1|TUBB6	1	4.08756737498e-05	HOXA9
Human Leukemia_Stam09_150genes_Figure5 (20032505-TableS7)	4	HOXA2|HOXA3|HOXA4|HOXA5	1.13906728321e-05	15	2.13917550546e-05	ADARB1|BTBD3|CPNE8|CYB5R2|IL12RB2|KHDRBS3|KLF8|KLF11|LDHB|PABPC4|PLCB4|PLEKHG4B|TGFA|TMEM64|ZNF521	0	1.38959060967e-06	
Human Leukemia_Stam09_150genes_Figure6 (20032505-TableS8)	4	HOXA2|HOXA3|HOXA4|HOXA5	1.13906728321e-05	15	2.13917550546e-05	ADARB1|BTBD3|CPNE8|CYB5R2|IL12RB2|KHDRBS3|KLF8|KLF11|LDHB|PABPC4|PLCB4|PLEKHG4B|TGFA|TMEM64|ZNF521	0	1.38959060967e-06	
Human Leukemia_Taghon_20genes (12764384-Table2)	6	HOXA1|HOXA3|HOXA4|HOXA5|HOXA7|HOXA10	7.57306268075e-05	1	0.000151461253615	HOXA6	2	6.06479728208e-21	HOXA9|HOXA11
Human Leukemia_Toren05_133genes (16140871-Table1)	2	HOXA5|HOXA10	3.76236799033e-05	16	7.37994146896e-05	ANGPT1|ARHGAP22|BTBD3|DSG2|GNAI1|HACD1|HLF|IL12RB2|ITM2C|KIT|MPL|NUDT11|PLCB4|PROM1|SCHIP1|SERPINE2	2	1.4479451169e-06	HMGA2|HOXA9
Human Leukemia_Verhaak05_50genes (16109776-Table3)	4	HOXA4|HOXA5|HOXA7|HOXA10	0.000167038016308	7	0.000333988843445	APP|ARHGAP22|HOXA6|ITM2C|LTBP1|PLA2G4A|RRAGD	0	8.71891703242e-08	
Human Leukemia_Verhaak05_568genes (16109776-TableS1)	4	HOXA4|HOXA5|HOXA7|HOXA10	0.000205844424045	55	4.44113654889e-08	ABCC4|ADCY3|AGTPBP1|ANXA8|APP|ARHGAP22|ASS1|BPI|C2CD2|CCL20|CHI3L1|CLU|CXCL2|CXCL3|DEFB1|ETS2|FAM171A1|FOXC1|GNAI1|GPM6B|HOXA6|IL6|ITGA6|ITM2C|KCNE5|KCNJ2|KCNK5|KIT|LCN2|LMO4|LTBP1|LTF|MPL|MSLN|NAMPT|PDE4B|PELI1|PHLDA1|PLA2G4A|POU4F1|PRAME|PRKD3|PROM1|PTX3|RAP2A|RRAGD|SCHIP1|SCPEP1|SERPINE2|SMCO4|TCF3|TMOD1|TNFRSF21|VLDLR|WASF1	0	0.000411644436725	
JAATINEN_HEMATOPOIETIC_STEM_CELL_UP	3	HOXA3|HOXA5|HOXA10	3.28736812541e-06	41	1.34785128501e-06	ADGRA3|ADGRG6|ANGPT1|ARHGAP22|BCL11A|BTBD3|C11ORF95|CDCA7|CDK6|CNKSR3|CRISPLD1|CYYR1|DSG2|ETV6|FABP5|GNA15|GNAI1|HACD1|HLF|ITGA9|ITM2C|KHDRBS3|KIT|LPIN1|MPL|NT5DC2|PLA2G4A|PLAGL1|PLCB4|PM20D2|PROM1|SCHIP1|SLC25A27|STMN1|TNFRSF21|UMODL1|VWDE|WASF1|ZNF521|ZNF618|ZNF711	2	5.22688496582e-06	HMGA2|HOXA9
LEONARD_HYPOXIA	2	HOXA4|HOXA5	0.000395835812005	10	3.75399415258e-05	ADORA2B|DDIT4|DEPP1|MXI1|NFIL3|PFKP|PLIN2|SIK1|SLC2A3|TGFA	0	0.000754131682484	
Li(PMID: 24336226)-2013-MolSigVaccines_Hox cluster I (M17.0)	5	HOXA3|HOXA4|HOXA5|HOXA7|HOXA10	2.05704130362e-05	2	4.11408248475e-05	CPNE8|SKIDA1	0	1.22481639194e-12	
Li(PMID: 24336226)-2013-MolSigVaccines_Hox cluster VI (M107)	4	HOXA2|HOXA3|HOXA4|HOXA10	7.64397190784e-06	2	1.52879436858e-05	HOXA6|SKIDA1	1	1.29879491218e-13	HOXA9
MEISSNER_BRAIN_HCP_WITH_H3K27ME3	3	HOXA4|HOXA5|HOXA10	0.000152409597052	27	0.00030479154588	ALDH1A3|BARX1|CALB2|COL13A1|CRLF1|CYP24A1|DMRTA1|FAM89A|FOXL1|GAL|GRB10|IGF2BP3|IL12RB2|IRX4|KCNE5|KRT7|LARGE2|LGR6|NTF4|PCSK9|PKP1|POU2F3|PRDM13|RSPO4|SIM1|TDRD6|TLX1	3	2.76482238711e-08	HMGA2|HOXA11|HOXA13
MODULE_220	2	HOXA4|HOXA5	8.19054895349e-05	55	3.46678549506e-11	ACTG2|ADARB1|ANGPT1|CDC42EP1|CHRM1|CRABP1|CSRP2|CXCL1|CXCL8|DLX5|EDN3|EFNA5|EPHA2|EPHA4|EPHB1|EPHB3|EPHB6|FABP7|FGF2|FGF11|GJB5|GSTP1|HBEGF|HLF|IL6|KIT|KRT5|KRT6A|KRT6B|KRT13|KRT14|KRT15|KRT16|KRT17|LAMB3|LAMC2|LIF|MGP|MID1|MYBPC1|NGFR|NRG2|PI3|POU4F1|ROR1|S100A1|S100B|SCRG1|SIX3|SOX9|TLE1|TLX1|TNNI2|UGT8|ZIC1	2	0.000163810944402	FOXG1|HMGA2
Mouse Breast_Wright08_416genes (18394172-S4GeneList)	3	HOXA5|HOXA7|IGF2BP2	4.61862724653e-05	54	2.83976192065e-14	ADAMTS1|ALPL|ANGPTL4|ANXA8|CALML3|CLCA2|CRLF1|CRYBG3|CYP26B1|DUOX2|FABP5|FRMD3|GAS2|ID4|IL27RA|ITGA6|ITGB4|KHDRBS3|KLK6|KRT13|KRT23|LAMB3|LAMC2|LBP|LONRF3|LPAR3|LTF|LY6D|MET|MFHAS1|MSLN|NFIX|NGEF|NHSL1|OGFRL1|PHLDA1|PKP1|PLIN2|PPARGC1A|PPP1R14C|PTPRZ1|PTX3|RGMA|RRAGD|S100A8|S100A9|S100B|SERPINB5|SLC6A15|TMEM40|TRPV6|TSPAN8|TSPAN12|WIF1	1	9.23725449022e-05	HMGA2
Mouse StemCell_Murat08_12genes (18565887-TableA13)	3	HOXA3|HOXA5|HOXA10	0.000303745096074	1	0.000607490192133	PROM1	2	1.57671314188e-14	HOXA9|SKAP2
NIKOLSKY_BREAST_CANCER_7P15_AMPLICON	7	HOXA1|HOXA2|HOXA3|HOXA4|HOXA5|HOXA7|HOXA10	8.23627149135e-09	1	1.64725429827e-08	HOXA6	3	9.26160964522e-32	HOXA9|HOXA11|HOXA13
ROSS_LEUKEMIA_WITH_MLL_FUSIONS	4	HOXA4|HOXA5|HOXA7|HOXA10	0.000184233372315	10	0.000368462048945	ANXA5|CORO1C|GPM6B|HIF1A|MAP3K5|PNMA8A|PROM1|SCPEP1|TIGAR|VLDLR	1	4.69568586868e-09	HOXA9
RTTTNNNYTGGM_UNKNOWN	2	HOXA2|HOXA7	0.000532453353943	19	0.000780294045057	BCL11A|C4ORF19|CCDC71L|CLDN14|CREB5|CSRNP3|DCX|DMD|EGFR|KLF5|LMO4|NDP|NFIB|PALM2|PHEX|PROK2|RCAN1|TSPAN6|ZIC1	1	0.000284612662829	HOXA11
SMID_BREAST_CANCER_NORMAL_LIKE_UP	2	HOXA5|HOXA7	0.000337378004536	53	3.19372646263e-05	ADARB1|ARL4C|BBOX1|BCL11A|CCL2|CHI3L1|CLU|COL17A1|CRYAB|CXCL2|DEPP1|DMD|DTNB|EDN3|EPHA4|FAM49A|FAM107A|FMO2|FZD7|HIVEP2|HSPB2|ID4|IL1R2|IL6|IL27RA|ITM2C|KIT|KLK7|KRT5|KRT14|LAMC3|LDHB|LPCAT4|LY75|MALL|MAPRE2|MET|NR3C2|NSG1|OPRPN|OXTR|RBMS1|RSU1|S100B|SATB1|SFRP1|SLC6A14|SOSTDC1|SYNM|TF|TMOD1|TP63|WIF1	2	0.000642818744446	HOXA9|SKAP2
TAATTA_CHX10_01	3	HOXA2|HOXA4|HOXA5	0.000198111890005	75	2.88602171803e-05	ACE2|ARHGAP26|ATP2B4|ATP11C|BACE2|BTBD3|C15ORF41|CA2|CCDC9B|CDH19|CDKN2C|CLIP4|CNTLN|CREB5|CYYR1|DCX|DMD|DMRTA1|DPP10|DSG1|EN1|EPHA2|ETS2|ETV6|FAM89A|FIGN|FTHL17|FZD7|GAS2|GJB6|GPC2|GPR157|GRHL1|HAS3|INVS|IRX4|KIRREL3|KRT23|LEMD1|LMO4|MID1|MPPED2|MUC15|MYBPC1|NDP|NFIL3|NFIX|NPAS2|OLFM4|PART1|PITPNM2|PPP1R14C|PROK2|PXDC1|RCAN1|RIPK4|SFRP1|SGMS2|SIX3|SKIDA1|SLC26A7|SMOC1|SORBS2|SP6|STAC|STAC2|TBX19|TP63|TRPM8|TSPAN8|TUBB6|VLDLR|WIF1|ZIC1|ZNF488	2	0.00036736356283	FOXG1|HOXA11
TATTATA_MIR374	2	HOXA1|HOXA10	7.04673471506e-05	35	5.10811143389e-05	ADGRL2|ARHGAP5|BICD2|BMP2|BRINP3|C3ORF58|CEBPB|CLIP4|CYP26B1|DMD|EN1|ETV5|ETV6|FAM135A|FNDC3B|HIVEP2|HLF|LRRN1|LTBP1|MAP2|MEX3B|NFIX|PDE4B|PDE4D|PELI1|PNRC1|PPARGC1A|PROK2|QKI|SCN2B|SOX4|TGFA|TMEM108|UBE2E3|ZNF711	2	8.98535799624e-05	FOXG1|HOXA11
TGATTTRY_GFI1_01	4	HOXA2|HOXA3|HOXA5|HOXA7	0.000270053566903	29	0.000536893237115	AGPAT4|BRINP3|CCSER2|CDCA7|CLDN8|CREB5|DMD|FAM133A|FBXO32|GAS2|GRB10|HOXA6|HS3ST4|IGF2BP3|ITGB8|LIF|MID1|MLIP|MRAS|MYBPC1|POU3F2|PPARGC1A|SIX3|SLC2A12|SOX4|SP6|VSTM2L|ZIC1|ZNF521	1	3.2138966916e-06	HOXA9
TTANTCA_UNKNOWN	3	HOXA1|HOXA2|HOXA5	0.000385590172127	94	3.04291570581e-07	ADGRG6|ADGRL2|ALDH1A3|ATP6V1C2|BACE2|C15ORF41|CDK6|CDKN2C|CEBPB|CELA1|CLCN4|CLDN8|CORO1C|CREB5|CREM|CRLF1|CSRNP3|CXADR|DBN1|DCX|DLG2|DMD|DSG1|DSG3|E2F3|EDN1|EFNA5|EN1|ERRFI1|ETS2|FABP6|FERMT1|GATA6|GCNT2|GNAI1|HS3ST4|IRX4|ITPRIP|KCNIP4|KIAA1456|KIF1B|KIRREL3|KLF5|KLHL13|KRT14|KRT23|LAMC2|LINGO2|LMO4|LRRN1|LTBP1|MAP2|MAP3K5|MET|MFGE8|MFSD2A|MPZL3|MSN|MYO3B|MYO10|NCALD|NDP|NFIX|NMT2|NOTCH1|NR3C2|NT5DC2|PAK3|PART1|PDE4D|PIM1|PPM1L|PRIMA1|PTCH1|PTGS2|PTK7|PTPRK|RCAN1|RGL1|RIPK4|ROR1|RYR2|SH3TC2|SLAIN1|SLC43A3|SOX4|SOX10|STAC2|TBX19|TCF7L1|TMEM131L|TRPM8|VLDLR|WASF1	2	0.000770876052683	HMGA2|HOXA9
VERHAAK_AML_WITH_NPM1_MUTATED_UP	4	HOXA4|HOXA5|HOXA7|HOXA10	5.79299450983e-05	22	0.000115506805987	ABCC4|ARHGAP22|CCL20|CLU|CXCL2|CXCL3|DEFB1|ETS2|FOXC1|HOXA6|IL6|KCNJ2|KCNK5|LTBP1|NAMPT|PELI1|PHLDA1|PLA2G4A|PTX3|SCHIP1|SCPEP1|SMCO4	1	3.53084209661e-07	HOXA9
WGTTNNNNNAAA_UNKNOWN	2	HOXA3|HOXA5	0.000319955737901	52	0.000577480320281	ACTR3|ADCY3|ALDH1A3|ARL4A|C3ORF58|CAPN6|CCDC71L|CCSER2|CDKN2C|CEBPB|CHML|CLDN8|COL27A1|CREB5|DLG2|DMD|EN1|EPHB1|ETS2|ETV5|FRMD5|FZD7|GLIPR2|HS3ST4|JARID2|KLF5|KLHL13|LMO4|MARK1|MGP|MPPED2|MPZL3|MXI1|NFIB|NPAS2|OXR1|PHEX|PPARGC1B|PPP2R3A|PRDM13|PRSS12|RASGEF1A|ROR1|SIRPA|SLC25A18|SLC26A7|STK38|TMEM131L|TSPAN12|UBE2E2|WASF1|ZNF521	3	6.24311555204e-05	HOXA9|HOXA11|SKAP2
WONG_ADULT_TISSUE_STEM_MODULE	4	HOXA2|HOXA3|HOXA5|HOXA10	0.000144878882485	74	8.80359662025e-06	ACTR3B|ADAMTS1|ADARB1|ADGRA3|ADM|APP|BTG3|CAND2|CEBPB|COL9A3|CXCL2|CYP7B1|DAB2IP|DDIT4|DMD|EPHB3|ERRFI1|ESYT3|ETS2|EYA2|FOXC1|GPRC5B|GPX7|HBEGF|HLF|ID4|IFNGR1|IL6|INVS|ITM2C|KHDRBS3|KIT|KLK8|KRT6A|LPAR3|LPIN1|LTBP1|LY75|MAP2|MFGE8|MPL|MSN|NDRG2|NFIB|NFIX|PCP4L1|PHLDA1|PIGR|PIK3C2G|PNRC1|PPFIBP2|PTGS2|PTPRK|RBP1|RGS2|RYR2|S100A1|S100A13|SFRP1|SLC6A15|SLC9B2|SOCS3|SOX4|STAC|TENM2|TES|TLE1|TNFRSF11B|TRPC6|TSPAN6|TUBB6|UBE2E2|VLDLR|ZNF521	1	0.00028095416835	HOXA9
YATTNATC_UNKNOWN	4	HOXA1|HOXA2|HOXA7|HOXA10	0.000608211583392	35	0.000984373780957	APP|BRINP3|C15ORF41|CCNYL1|CNTLN|CREB5|DCX|DLG2|DMD|DSG3|EN1|ETV6|IGF2BP3|KCNQ4|KIF1B|LMO4|MLIP|MXI1|NANOS1|NDP|NFIX|NR3C2|NXPH4|PI15|PRDM13|PTCHD1|QKI|SLC12A1|SLC16A10|SLC43A3|SP6|TCF7L2|TRPC6|TTYH1|ZIC1	0	0.000232049385826	
YCATTAA_UNKNOWN	5	HOXA1|HOXA2|HOXA3|HOXA7|HOXA10	9.38446111388e-05	51	0.000183885617164	ARHGAP22|ATP13A4|BOC|C15ORF41|CALML4|CCDC9B|CLDN14|CNTLN|CREB5|CSRNP3|DCX|DLG2|DMD|DUOX1|EFNA5|EPHA2|EPHB6|FRMD5|HS6ST2|IRX4|ITGA9|KCND1|KCNIP4|KLHL13|KRT23|LEMD1|LMO4|MARK1|MFGE8|MPP6|MPPED2|NDP|OSR1|PDE4D|PLIN2|PRDM13|PRKD3|PTCH1|RBMS1|SATB1|SGMS2|SKIDA1|SLC5A1|SLC12A1|SLC26A7|SLC41A2|SMOC1|SOX4|STAC2|TCF7L1|TTYH1	1	3.80360511355e-06	HOXA9
anatomical structure formation involved in morphogenesis [GoID:GO:0048646; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	4	HOXA1|HOXA3|HOXA5|HOXA7	5.79151755834e-05	96	3.49353012771e-06	ADAM17|ADAMTS1|ADAMTS9|ADGRG6|ADM|AGFG1|AGTPBP1|ALDH1A3|AMOT|ANGPT1|ANGPTL4|ANXA3|ARHGAP22|BMP2|C1GALT1|CCL2|CEACAM1|CELA1|CHI3L1|CX3CL1|CXCL8|CXCL17|DAB2IP|DKK1|DLX5|DLX6|EDN1|ELF5|EPHA2|EPHB1|EPHB3|ETS2|EYA2|FGF2|FGF9|FOXC1|FOXD1|FZD5|FZD7|FZD8|GATA6|HEY2|HIF1A|IL6|IRX1|ITGA2|ITGA6|ITGB1BP1|ITGB4|KLF5|LAMB3|LMO4|MFGE8|MTHFD1L|MTMR2|MYBPC1|MYPN|NFASC|NFIB|NGFR|NOTCH1|NRARP|NRG3|NTF4|OSR1|PCDH8|PERP|PIM1|PODXL|PPARA|PPARGC1B|PRKCA|PRKX|PROK2|PROM1|PTCH1|PTGS2|PTK7|PTPN14|RDH10|S100A7|SDK2|SFRP1|SLC12A6|SMO|SOX4|SOX8|SOX9|SOX11|TGFB2|TMOD1|TP63|TSPAN12|UGT8|VANGL2|VASH2	2	0.000112336821039	HMGA2|HOXA11
angiogenesis [GoID:GO:0001525; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	3	HOXA3|HOXA5|HOXA7	0.000509757495772	44	0.000548643098047	ADAMTS9|ADM|AMOT|ANGPT1|ANGPTL4|ANXA3|ARHGAP22|C1GALT1|CCL2|CEACAM1|CELA1|CHI3L1|CX3CL1|CXCL8|CXCL17|DAB2IP|EDN1|EPHA2|EPHB1|EPHB3|FGF2|FGF9|FOXC1|FZD5|FZD8|GATA6|HIF1A|IL6|ITGB1BP1|KLF5|MFGE8|NGFR|NOTCH1|NRARP|PRKCA|PRKX|PROK2|PTGS2|S100A7|SFRP1|SLC12A6|TGFB2|TSPAN12|VASH2	1	0.000470871893496	HMGA2
blood vessel development [GoID:GO:0001568; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	4	HOXA1|HOXA3|HOXA5|HOXA7	0.0004601972696	56	0.000795315546535	ADAMTS9|ADM|AMOT|ANGPT1|ANGPTL4|ANXA3|ARHGAP22|C1GALT1|CCL2|CEACAM1|CELA1|CHI3L1|CX3CL1|CXCL8|CXCL17|DAB2IP|EDN1|EPHA2|EPHB1|EPHB3|FGF2|FGF9|FOXC1|FZD5|FZD8|GATA6|HEY2|HIF1A|IL6|ITGB1BP1|ITGB8|KLF5|LTBP1|MFGE8|MYO1E|NGFR|NOTCH1|NRARP|OSR1|PRKCA|PRKX|PROK2|PTGS2|PTK7|QKI|S100A7|SFRP1|SLC12A6|SMO|SOCS3|SOS1|SOX4|TCF7L2|TGFB2|TSPAN12|VASH2	1	0.000125078992666	HMGA2
blood vessel morphogenesis [GoID:GO:0048514; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	4	HOXA1|HOXA3|HOXA5|HOXA7	0.000320246599543	50	0.000577480320281	ADAMTS9|ADM|AMOT|ANGPT1|ANGPTL4|ANXA3|ARHGAP22|C1GALT1|CCL2|CEACAM1|CELA1|CHI3L1|CX3CL1|CXCL8|CXCL17|DAB2IP|EDN1|EPHA2|EPHB1|EPHB3|FGF2|FGF9|FOXC1|FZD5|FZD8|GATA6|HEY2|HIF1A|IL6|ITGB1BP1|KLF5|MFGE8|MYO1E|NGFR|NOTCH1|NRARP|PRKCA|PRKX|PROK2|PTGS2|QKI|S100A7|SFRP1|SLC12A6|SMO|SOS1|SOX4|TGFB2|TSPAN12|VASH2	1	6.30128788041e-05	HMGA2
cardiovascular system development [GoID:GO:0072358; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	4	HOXA1|HOXA3|HOXA5|HOXA7	0.000110651513674	63	6.35732852315e-05	ADAMTS9|ADM|AMOT|ANGPT1|ANGPTL4|ANP32B|ANXA3|ARHGAP22|C1GALT1|CCL2|CEACAM1|CELA1|CHI3L1|CX3CL1|CXCL8|CXCL17|DAB2IP|EDN1|EPHA2|EPHB1|EPHB3|ERRFI1|FGF2|FGF9|FOXC1|FZD5|FZD8|GATA6|HEY2|HIF1A|IL6|ITGB1BP1|ITGB8|KIT|KLF5|LIF|LTBP1|MFGE8|MYO1E|NDP|NGFR|NOTCH1|NRARP|OSR1|PRKCA|PRKX|PROK2|PTGS2|PTK7|PTPN14|QKI|S100A7|SFRP1|SGCB|SLC12A6|SMO|SOCS3|SOS1|SOX4|TCF7L2|TGFB2|TSPAN12|VASH2	1	0.000157729742116	HMGA2
chr7p15	7	HOXA1|HOXA2|HOXA3|HOXA4|HOXA5|HOXA7|HOXA10	3.59186019614e-07	10	7.18372039229e-07	CREB5|FAM126A|HOXA6|IGF2BP3|INMT-MINDY4|ITGB8|MPP6|OSBPL3|STEAP1B|WIPF3	5	9.93765011955e-27	HOXA9|HOXA11|HOXA11-AS|HOXA13|SKAP2
circulatory system development [GoID:GO:0072359; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	4	HOXA1|HOXA3|HOXA5|HOXA7	0.000467452855857	96	5.48637072417e-07	ADAMTS1|ADAMTS9|ADGRG6|ADM|AMOT|ANGPT1|ANGPTL4|ANP32B|ANXA3|ARHGAP22|BMP2|BVES|C1GALT1|C3ORF58|CCL2|CDKL1|CEACAM1|CELA1|CHI3L1|CX3CL1|CXADR|CXCL8|CXCL17|DAB2IP|DKK1|DNAH11|DSG2|EDN1|EGFR|EPHA2|EPHB1|EPHB3|ERRFI1|FGF2|FGF9|FOXC1|FOXL1|FZD5|FZD7|FZD8|GATA6|HEY2|HIF1A|IL6|IRX4|ITGB1BP1|ITGB8|JARID2|JPH2|KIT|KLF5|LIF|LMO4|LTBP1|MFGE8|MYO1E|MYPN|NDP|NDRG4|NGFR|NOTCH1|NRARP|OSR1|OXTR|PIM1|PLCE1|POU4F1|PPARA|PRKCA|PRKX|PROK2|PTCH1|PTGS2|PTK7|PTPN14|QKI|RYR1|RYR2|S100A7|SFRP1|SGCB|SIK1|SLC12A6|SMO|SMYD1|SOCS3|SORBS2|SOS1|SOX4|SOX9|SOX11|TCF7L2|TGFB2|TSPAN12|VANGL2|VASH2	1	0.000934357074642	HMGA2
embryo development [GoID:GO:0009790; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	5	HOXA1|HOXA3|HOXA5|HOXA7|HOXA10	0.000184186103055	82	0.000368008191466	ADM|ALDH1A3|AMOT|ANGPT1|APBA2|BMP2|CEBPB|CXCL8|CYP26B1|DKK1|DLX5|DLX6|DNMT3A|EDN1|EGFR|ELF5|EN1|ETS2|EYA2|FGF2|FGF9|FOXC1|FOXI1|FZD5|FZD7|GATA6|GJB3|GJB5|GJB6|HEY2|HIF1A|HORMAD1|HOXA6|HSD17B2|IRX1|ITGA2|ITGB4|KCNQ4|KIT|LAMB3|LIF|LMO4|MDFI|MTHFD1L|MYO1E|MYO3B|NDRG4|NES|NOTCH1|NPM2|NRARP|NTN1|OSR1|PCDH8|PGAP1|PPP2R3A|PTCH1|PTK7|RDH10|RYR2|SCEL|SFRP1|SIX3|SLC34A2|SMO|SOCS3|SOS1|SOX4|SOX8|SOX9|SOX10|SOX11|STOX2|TGFB2|TP63|TPO|VANGL2|VASH2|YBX1|YBX3|ZFP57|ZIC1	3	3.6401464382e-07	HMGA2|HOXA9|HOXA11
embryonic morphogenesis [GoID:GO:0048598; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	5	HOXA1|HOXA3|HOXA5|HOXA7|HOXA10	0.000101617824954	54	0.000203228603248	ADM|ALDH1A3|AMOT|CYP26B1|DKK1|DLX5|DLX6|EDN1|ELF5|EN1|ETS2|EYA2|FGF2|FGF9|FOXC1|FOXI1|FZD5|FZD7|GATA6|GJB5|GJB6|HIF1A|HOXA6|IRX1|ITGA2|ITGB4|KCNQ4|LAMB3|LMO4|MDFI|MTHFD1L|MYO3B|NDRG4|NOTCH1|NTN1|OSR1|PCDH8|PTCH1|PTK7|RDH10|RYR2|SFRP1|SIX3|SMO|SOCS3|SOS1|SOX4|SOX8|SOX9|SOX11|TGFB2|TP63|VANGL2|ZIC1	3	7.04666040511e-09	HMGA2|HOXA9|HOXA11
embryonic organ development [GoID:GO:0048568; evidenceTypes:IBA|IDA|IEA|IEP|IGI|IMP|ISS|TAS]	4	HOXA1|HOXA3|HOXA5|HOXA7	0.000113462248878	43	0.000206592548557	ADM|ALDH1A3|CEBPB|CXCL8|DLX5|DLX6|EDN1|EGFR|EN1|FGF9|FOXC1|FOXI1|FZD5|GJB5|GJB6|HEY2|HIF1A|HOXA6|KCNQ4|KIT|LIF|MDFI|MTHFD1L|MYO3B|NDRG4|NES|NOTCH1|NTN1|OSR1|PTCH1|PTK7|RDH10|RYR2|SIX3|SMO|SOCS3|SOX9|SOX11|TGFB2|TPO|VANGL2|VASH2|ZIC1	1	2.03319491988e-05	HOXA11
proximal_distal pattern formation [GoID:GO:0009954; evidenceTypes:IEA|ISS]	1	HOXA10	0.000248888229856	7	0.000495201057559	CHSY1|CYP26B1|EN1|IRX1|OSR1|SIX3|TP63	2	2.57540215355e-06	HOXA9|HOXA11
skeletal system development [GoID:GO:0001501; evidenceTypes:IBA|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	5	HOXA1|HOXA3|HOXA5|HOXA7|HOXA10	0.000253677557715	46	0.000507355057956	ALPL|BMP2|CHI3L1|CHRDL2|CHSY1|COL13A1|COL27A1|CREB3L2|CYP26B1|DLX5|DLX6|EDN1|EN1|ETS2|FGF2|FGF9|FOXC1|HAPLN3|HDAC4|HIF1A|HOXA6|ITGB8|KIT|LRRK1|LTF|MDFI|MGP|MTHFD1L|NAB1|NFIB|OSR1|PAPSS2|PHEX|PPARGC1B|RDH10|RGN|RYR1|SFRP1|SLC9B2|SOX4|SOX9|SOX11|TGFB2|TNFRSF11B|TNFSF11|TP63	4	5.7474466742e-11	HMGA2|HOXA9|HOXA11|HOXA13
vasculature development [GoID:GO:0001944; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	4	HOXA1|HOXA3|HOXA5|HOXA7	9.77624613882e-05	63	4.70785309895e-05	ADAMTS9|ADM|AMOT|ANGPT1|ANGPTL4|ANP32B|ANXA3|ARHGAP22|C1GALT1|CCL2|CEACAM1|CELA1|CHI3L1|CX3CL1|CXCL8|CXCL17|DAB2IP|EDN1|EPHA2|EPHB1|EPHB3|ERRFI1|FGF2|FGF9|FOXC1|FZD5|FZD8|GATA6|HEY2|HIF1A|IL6|ITGB1BP1|ITGB8|KIT|KLF5|LIF|LTBP1|MFGE8|MYO1E|NDP|NGFR|NOTCH1|NRARP|OSR1|PRKCA|PRKX|PROK2|PTGS2|PTK7|PTPN14|QKI|S100A7|SFRP1|SGCB|SLC12A6|SMO|SOCS3|SOS1|SOX4|TCF7L2|TGFB2|TSPAN12|VASH2	1	0.000148446391787	HMGA2
